Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs9321076 chr6:127655614 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9321079 chr6:127706323 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs935901 chr15:43651256 G/C 9.39E-5 110 13.15 20.3 0 KM Plot
LAML rs937273 chr10:31018297 G/T 0.000176 111 1 6.58 16.2 KM Plot
LAML rs937274 chr10:31018472 C/T 0.000176 111 1 6.58 16.2 KM Plot
LAML rs9372860 chr6:127546605 G/A 3.29E-5 108 0.98 16.2 15.2 KM Plot
LAML rs9375492 chr6:127545492 C/T 2.41E-5 111 15.2 16.23 0.98 KM Plot
LAML rs9375499 chr6:127618072 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9375501 chr6:127652539 C/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9375503 chr6:127677071 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9385419 chr6:127597591 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9388561 chr6:127634921 C/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9388571 chr6:127706262 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9398836 chr6:127576497 T/G 2.43E-5 110 0.98 16.27 15.2 KM Plot
LAML rs9398837 chr6:127635217 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot